Upgraded to Macos Sierra- 2minute boot time

Hi- Looking for any feedback you can provide as to why it takes 2 min to boot? Im sure I have something setup wrong, but lack the expertise about this. Here's a screenshot from verbose mode that shows a lot of repeat running of FAKEPCI ID.

Also- whenever I go to shut down, it just sits there for a while until I hit the power button. Not sure what is going on.

Any help? Thanks!